8CNE

Pa.FabF-C164A in complex with N-(propan-2-yl)-1H-pyrazole-3-carboxamide


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2980.20M ammonium formate and 31.2% PEG3350
Crystal Properties
Matthews coefficientSolvent content
2.1442.39

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 101.202α = 90
b = 104.378β = 90
c = 142.284γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 2M2022-03-09MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE MASSIF-10.96546ESRFMASSIF-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.56672.6699.80.0470.99918.35.5105352
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.5661.59399.80.7860.8012.25.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.5764.79100075515199.640.183070.1820.20396RANDOM24.88
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.56-0.221.77
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.403
r_dihedral_angle_4_deg16.198
r_dihedral_angle_3_deg12.976
r_dihedral_angle_1_deg6.707
r_long_range_B_refined6.664
r_long_range_B_other6.658
r_scangle_other5.767
r_scbond_it3.92
r_scbond_other3.919
r_mcangle_it3.245
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.403
r_dihedral_angle_4_deg16.198
r_dihedral_angle_3_deg12.976
r_dihedral_angle_1_deg6.707
r_long_range_B_refined6.664
r_long_range_B_other6.658
r_scangle_other5.767
r_scbond_it3.92
r_scbond_other3.919
r_mcangle_it3.245
r_mcangle_other3.245
r_mcbond_other2.387
r_mcbond_it2.386
r_angle_other_deg1.369
r_angle_refined_deg1.344
r_chiral_restr0.069
r_bond_refined_d0.005
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6054
Nucleic Acid Atoms
Solvent Atoms240
Heterogen Atoms77

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing