7ZEX

Complex Cyp33-RRMdelta alpha : UAAUGUCG RNA


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1 mM [U-100% 15N] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE E, 1 mM RNA (5'-R(*UP*AP*AP*UP*GP*UP*CP*G)-3'), 40 mM sodium chloride, 40 mM sodium phosphate90% H2O/10% D2O80 mM7AMBIENT Pa310.15Bruker AVANCE III 900
22D 1H-13C HSQC aliphatic1 mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE E, 1 mM RNA (5'-R(*UP*AP*AP*UP*GP*UP*CP*G)-3'), 40 mM sodium chloride, 40 mM sodium phosphate90% H2O/10% D2O80 mM7AMBIENT Pa310.15Bruker AVANCE III 900
32D 1H-13C HSQC aromatic1 mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE E, 1 mM RNA (5'-R(*UP*AP*AP*UP*GP*UP*CP*G)-3'), 40 mM sodium chloride, 40 mM sodium phosphate90% H2O/10% D2O80 mM7AMBIENT Pa310.15Bruker AVANCE III 900
43D 1H-15N NOESY1 mM [U-100% 15N] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE E, 1 mM RNA (5'-R(*UP*AP*AP*UP*GP*UP*CP*G)-3'), 40 mM sodium chloride, 40 mM sodium phosphate90% H2O/10% D2O80 mM7AMBIENT Pa310.15Bruker AVANCE III 900
53D 1H-13C NOESY aliphatic1 mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE E, 1 mM RNA (5'-R(*UP*AP*AP*UP*GP*UP*CP*G)-3'), 40 mM sodium chloride, 40 mM sodium phosphate90% H2O/10% D2O80 mM7AMBIENT Pa310.15Bruker AVANCE III 900
63D 1H-13C NOESY aromatic1 mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE E, 1 mM RNA (5'-R(*UP*AP*AP*UP*GP*UP*CP*G)-3'), 40 mM sodium chloride, 40 mM sodium phosphate90% H2O/10% D2O80 mM7AMBIENT Pa310.15Bruker AVANCE III 900
73D F3-FILTERED- F2-EDITED 13C NOESY1 mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE E, 1 mM RNA (5'-R(*UP*AP*AP*UP*GP*UP*CP*G)-3'), 40 mM sodium chloride, 40 mM sodium phosphate90% H2O/10% D2O80 mM7AMBIENT Pa310.15Bruker AVANCE III 900
102D F2- FILTERED NOESY1 mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE E, 1 mM RNA (5'-R(*UP*AP*AP*UP*GP*UP*CP*G)-3'), 40 mM sodium chloride, 40 mM sodium phosphate90% H2O/10% D2O80 mM7AMBIENT Pa310.15Bruker AVANCE III 900
92D 1H-13C HSQC aliphatic1 mM [U-100% 15N] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE E, 1 mM RNA (5'-R(*UP*AP*AP*UP*GP*UP*CP*G)-3'), 40 mM sodium chloride, 40 mM sodium phosphate90% H2O/10% D2O80 mM7AMBIENT Pa310.15Bruker AVANCE III 700
82D 1H-13C HSQC aromatic1 mM [U-100% 15N] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE E, 1 mM RNA (5'-R(*UP*AP*AP*UP*GP*UP*CP*G)-3'), 40 mM sodium chloride, 40 mM sodium phosphate90% H2O/10% D2O80 mM7AMBIENT Pa310.15Bruker AVANCE III 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III900
2BrukerAVANCE III700
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number250
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAmber10Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentSparkyGoddard
4peak pickingSparkyGoddard