7VW8

Helicoverpa armigera pheromone-binding protein PBP1 at pH 7.5

X-RAY DIFFRACTION

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Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	2FJY

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	7.5	298	peg

Crystal Properties
Matthews coefficient	Solvent content
1.73	28.89

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 32.03	α = 90
b = 32.604	β = 97.884
c = 54.792	γ = 90

Symmetry
Space Group	P 1 21 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	ADSC QUANTUM 315		2014-05-12	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SSRF BEAMLINE BL17U1	0.9792	SSRF	BL17U1

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.3	50	93.1	0.066	0.985	17.7	4.3		27772

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.3	1.32			0.5	0.912

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Cut-off Sigma (F)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	2FJY	1.3	20.866	2	22332	1108	80.328	0.18	0.1797	0.1787	0.1976	RANDOM	20.223

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.156		-1.412	-1.523		1.993

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	42.934
r_dihedral_angle_4_deg	12.835
r_dihedral_angle_3_deg	11.704
r_dihedral_angle_1_deg	4.632
r_rigid_bond_restr	3.227
r_lrange_it	2.869
r_lrange_other	2.863
r_scangle_it	2.566
r_scangle_other	2.564
r_mcangle_other	2.349
r_mcangle_it	2.341
r_scbond_it	2.183
r_scbond_other	2.183
r_mcbond_it	1.792
r_mcbond_other	1.736
r_angle_other_deg	1.482
r_angle_refined_deg	1.378
r_symmetry_nbd_refined	0.28
r_nbd_other	0.267
r_nbd_refined	0.226
r_symmetry_xyhbond_nbd_refined	0.187
r_symmetry_nbd_other	0.179
r_nbtor_refined	0.165
r_xyhbond_nbd_refined	0.163
r_symmetry_nbtor_other	0.079
r_chiral_restr	0.069
r_bond_refined_d	0.008
r_gen_planes_refined	0.006
r_bond_other_d	0.001
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	1048
Nucleic Acid Atoms
Solvent Atoms	62
Heterogen Atoms

Software

Software
Software Name	Purpose
REFMAC	refinement
HKL-2000	data reduction
HKL-2000	data scaling
BALBES	phasing