Experiment: 7S4Z

X-RAY DIFFRACTION

Serial Crystallography (SX)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	1IC6

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	BATCH MODE		298	0.1 M MES pH 6.5, 0.5 sodium citrate, 0.1 M calcium chloride

Crystal Properties
Matthews coefficient	Solvent content
2.19	43.81

Symmetry
Space Group	P 43 21 2

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	298	PIXEL	DECTRIS PILATUS 6M		2018-09-06	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ALBA BEAMLINE XALOC	0.97918	ALBA	XALOC

Sample delivery method
Diffraction ID	Description	Sample Delivery Method
1	LCP Injection	injection

Data Reduction
Diffraction ID	Frames Indexed	Crystal Hits	Frames Indexed	Latices Merged
1

Injection
Diffraction ID	Description	Flow Rate	Injector Diameter	Injection Power	Injector Nozzle	Filter Size	Carrier Solvent
1		undefined (µl/min)	undefined (µm)

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.9	48.4	100	0.9985	17.4	3757		21010			23.7

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.9	1.97	100		0.2255	0.6	315

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	1IC6	1.9	44.21	19879	1071	99.99	0.16664	0.16508	0.1767	0.19559	0.202	RANDOM	30.94

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
0.09			0.09		-0.18

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	34.812
r_dihedral_angle_4_deg	19.804
r_dihedral_angle_3_deg	12.819
r_dihedral_angle_1_deg	6.283
r_long_range_B_refined	3.957
r_long_range_B_other	3.954
r_scangle_other	2.672
r_scbond_it	1.637
r_scbond_other	1.635
r_angle_refined_deg	1.513

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	34.812
r_dihedral_angle_4_deg	19.804
r_dihedral_angle_3_deg	12.819
r_dihedral_angle_1_deg	6.283
r_long_range_B_refined	3.957
r_long_range_B_other	3.954
r_scangle_other	2.672
r_scbond_it	1.637
r_scbond_other	1.635
r_angle_refined_deg	1.513
r_mcangle_it	1.34
r_mcangle_other	1.339
r_angle_other_deg	1.196
r_mcbond_it	0.908
r_mcbond_other	0.907
r_chiral_restr	0.088
r_bond_refined_d	0.013
r_gen_planes_refined	0.006
r_bond_other_d	0.001
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	2031
Nucleic Acid Atoms
Solvent Atoms	89
Heterogen Atoms	6

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

7S4Z | pdb_00007s4z