7OSD

NMR Solution Structure of Peptide 12: First-in-class cyclic Temporin L analogue with antibacterial and antibiofilm activities


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
11D 1H2.0 mM PHE-VAL-PRO-TRP-PHE-LYS-LYS-PHE-DLE-GLU-ARG-ILE-LEU-NH2, 180 mM d-25 SDS, 20 mM d-38 DPC90% H2O/10% D2O0.0 mM5.01 atm298Bruker AVANCE NEO 700
22D 1H-1H NOESY2.0 mM PHE-VAL-PRO-TRP-PHE-LYS-LYS-PHE-DLE-GLU-ARG-ILE-LEU-NH2, 180 mM d-25 SDS, 20 mM d-38 DPC90% H2O/10% D2O0.0 mM5.01 atm298Bruker AVANCE NEO 700
32D 1H-1H TOCSY2.0 mM PHE-VAL-PRO-TRP-PHE-LYS-LYS-PHE-DLE-GLU-ARG-ILE-LEU-NH2, 180 mM d-25 SDS, 20 mM d-38 DPC90% H2O/10% D2O0.0 mM5.01 atm298Bruker AVANCE NEO 700
42D 1H-1H COSY2.0 mM PHE-VAL-PRO-TRP-PHE-LYS-LYS-PHE-DLE-GLU-ARG-ILE-LEU-NH2, 180 mM d-25 SDS, 20 mM d-38 DPC90% H2O/10% D2O0.0 mM5.01 atm298Bruker AVANCE NEO 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE NEO700
NMR Refinement
MethodDetailsSoftware
simulated annealingInsight II
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number200
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementInsight IIAccelrys Software Inc.
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentXEASYBartels et al.
4peak pickingXEASYBartels et al.
5processingTopSpinBruker Biospin
7collectionTopSpinBruker Biospin