7MU9

Solution NMR structure of the XVIPCD region from the T4SS effector X-Tfe(XAC2609) from Xanthomonas citri


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
93D HNCACB1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
103D CBCA(CO)NH1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
113D HNCA1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
123D HN(CO)CA1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
133D HNCO1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
14HN(CA)CO1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
153D-(H)CCH1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
163D-H(C)CH1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
173D HCCH-TOCSY1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
183D HCCH-TOCSY1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
193D 15N NOESY-HSQC1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
203D 13C NOESY-HSQC1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
212D 1H-1H NOESY1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
222D AROMATIC 13C NOESY-HSQC1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
233D (D2O) H(C)CH-TOCSY1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
243D (D2O) (H)CCH-TOCSY1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
253D (D2O) 13C NOESY-HSQC1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
263D (D2) 15N NOESY-HSQC1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
272D 1H-13C HSQC1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
282D 1H-15N HSQC1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide93% H2O/7% D2O100 mM NaCl mM8.01016 mbar298Bruker AVANCE III 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNSBrunger A. T. et.al.
2structure calculationARIALinge, O'Donoghue and Nilges
3chemical shift assignmentCcpNmr Analysis2.3CCPN