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Solution NMR Structure of PawL-Derived Peptide PLP-38
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 4 mg/mL PLP-38 50% H2O/50% CD3CN 0 mM 3.5 1 atm 298 Bruker AVANCE III 900 2 2D 1H-1H TOCSY 4 mg/mL PLP-38 50% H2O/50% CD3CN 0 mM 3.5 1 atm 298 Bruker AVANCE III 900 3 2D 1H-13C HSQC 4 mg/mL PLP-38 50% H2O/50% CD3CN 0 mM 3.5 1 atm 298 Bruker AVANCE III 900 4 2D 1H-15N HSQC 4 mg/mL PLP-38 50% H2O/50% CD3CN 0 mM 3.5 1 atm 298 Bruker AVANCE III 900 5 2D 1H-1H TOCSY 4 mg/mL PLP-38 50% H2O/50% CD3CN 0 mM 3.5 1 atm 288 Bruker AVANCE III 900 8 2D 1H-1H TOCSY 4 mg/mL PLP-38 50% H2O/50% CD3CN 0 mM 3.5 1 atm 293 Bruker AVANCE III 900 7 2D 1H-1H TOCSY 4 mg/mL PLP-38 50% H2O/50% CD3CN 0 mM 3.5 1 atm 303 Bruker AVANCE III 900 6 2D 1H-1H TOCSY 4 mg/mL PLP-38 50% H2O/50% CD3CN 0 mM 3.5 1 atm 308 Bruker AVANCE III 900
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 900
NMR Refinement Method Details Software simulated annealing using torsion angle dynamics CYANA simulated annealing using torsion angle dynamics and Cartesian space CNS simulated annealing minimized in explicit water using Cartesian dynamics CNS
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 50 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read 2 structure calculation CNS Brunger, Adams, Clore, Gros, Nilges and Read 5 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment CARA Keller and Wuthrich 4 peak picking CARA Keller and Wuthrich