7EB1

Solution NMR structure of the RRM domain of RNA binding protein RBM3 from homo sapiens


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.0 mM [U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
22D 1H-15N HSQC0.6 mM [U-100% 13C; U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
42D 1H-13C HSQC0.6 mM [U-100% 13C; U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
52D 1H-13C HSQC0.7 mM [U-10% 13C; U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
63D CBCA(CO)NH0.6 mM [U-100% 13C; U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
73D HNCACB0.6 mM [U-100% 13C; U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
83D HNCO0.6 mM [U-100% 13C; U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
93D HN(CA)CO0.6 mM [U-100% 13C; U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
103D C(CO)NH0.6 mM [U-100% 13C; U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
113D HBHA(CO)NH0.6 mM [U-100% 13C; U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
123D HCCH-TOCSY0.6 mM [U-100% 13C; U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
133D 1H-15N TOCSY1.0 mM [U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
143D 1H-13C NOESY0.6 mM [U-100% 13C; U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
153D 1H-15N NOESY1.0 mM [U-100% 15N] RNA Binding Motif 3 (RBM3) protein93% H2O/7% D2O16.51 atm298Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
simulated annealingPONDEROSA-C/S
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
5processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3data analysisSparkyGoddard
4peak pickingNMRFAM-SPARKYWoonghee Lee
1chemical shift assignmentNMRFAM-SPARKYWoonghee Lee
2structure calculationPONDEROSA-C/SWoonghee Lee
6refinementPONDEROSALee, W., Stark, J.L., and Markley, J.L.