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Structure of A151R from African swine fever virus Georgia
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 298 polyethylene glycol 20000, 0.1M MES pH 6.5
Crystal Properties Matthews coefficient Solvent content 2.47 50.15
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.869 α = 90 b = 49.869 β = 90 c = 128.081 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX300-HS 2019-07-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSRRC BEAMLINE TPS 05A 0.9998 NSRRC TPS 05A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.01 25 99 0.042 0.048 0.023 23.4 4.1 23627
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.01 2.08 98.6 0.415 0.482 0.243 0.866 3.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.01 24.49 22359 1118 99.04 0.2497 0.2492 0.2507 0.2585 0.2583 RANDOM 51.151
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.51 0.26 0.51 -1.66
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.755 r_dihedral_angle_3_deg 22.254 r_dihedral_angle_4_deg 19.824 r_dihedral_angle_1_deg 6.75 r_angle_refined_deg 1.5 r_angle_other_deg 0.83 r_chiral_restr 0.034 r_gen_planes_refined 0.03 r_gen_planes_other 0.025 r_bond_refined_d 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.755 r_dihedral_angle_3_deg 22.254 r_dihedral_angle_4_deg 19.824 r_dihedral_angle_1_deg 6.75 r_angle_refined_deg 1.5 r_angle_other_deg 0.83 r_chiral_restr 0.034 r_gen_planes_refined 0.03 r_gen_planes_other 0.025 r_bond_refined_d 0.01 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2564 Nucleic Acid Atoms Solvent Atoms 18 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement HKL-2000 data scaling PDB_EXTRACT data extraction HKL-2000 data reduction PHENIX phasing