7ZYX

Dimeric i-motif from 2'Farabinocytidine-modified TC5


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY10 mM NaPi90% H2O/10% D2O10 mM5.01 atm278Bruker AVANCE NEO 600
22D 1H-1H TOCSY10 mM NaPi90% H2O/10% D2O10 mM5.01 atm278Bruker AVANCE III HD 600
32D DQF-COSY10 mM NaPi90% H2O/10% D2O10 mM5.01 atm278Bruker AVANCE III HD 600
42D 1H-19F HOESY10 mM NaPi90% H2O/10% D2O10 mM5.01 atm278Bruker AVANCE III HD 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE NEO600
2BrukerAVANCE III HD600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriaback calculated data agree with experimental NOESY spectrum
Conformers Calculated Total Number45
Conformers Submitted Total Number10
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentNMRFAM-SPARKYLee W, Tonelli M, Markley JL.
2collectionTopSpinBruker Biospin
3structure calculationCYANAGuntert, Mumenthaler and Wuthrich
4peak pickingNMRFAM-SPARKYLee W, Tonelli M, Markley JL.
5refinementAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman