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COPII on membranes, outer coat left-handed rod
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2PM6
Sample COPII coat assembled on lipid bilayer
Specimen Preparation Sample Aggregation State 3D ARRAY Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SUBTOMOGRAM AVERAGING Number of Particles 182 Reported Resolution (Å) 40 Resolution Method Other Details SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD
-2430. (DEPOSITION ID: 11862). Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 (2PM6) Refinement Space Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 3.5
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version CTF CORRECTION CTFFIND CTF CORRECTION NOVACTF MODEL FITTING UCSF Chimera FINAL EULER ASSIGNMENT Dynamo RECONSTRUCTION Dynamo
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 3d ctf correction