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C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH N-(2-(1H-imidazol-4-yl)ethyl)-4-acetamido-3-(benzyloxy)benzamide
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6.5 293 30% PEG300, 0.1M MES
Crystal Properties Matthews coefficient Solvent content 2.25 45.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 71.718 α = 90 b = 52.618 β = 90 c = 32.017 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKU SATURN A200 2014-09-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU FR-E+ SUPERBRIGHT 1.54178
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 71.72 96 0.021 30 3 15744
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.6 1.68 81.1 0.105 7.8 1.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS FREE R-VALUE 1.605 26.309 15636 784 94.971 0.154 0.1523 0.18 0.1718 15.763
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.033 0.076 -0.043
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.626 r_dihedral_angle_4_deg 20.21 r_dihedral_angle_3_deg 13.21 r_lrange_it 6.402 r_lrange_other 6.4 r_dihedral_angle_1_deg 4.762 r_scangle_it 2.195 r_scangle_other 2.194 r_mcangle_other 1.498 r_mcangle_it 1.49
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.626 r_dihedral_angle_4_deg 20.21 r_dihedral_angle_3_deg 13.21 r_lrange_it 6.402 r_lrange_other 6.4 r_dihedral_angle_1_deg 4.762 r_scangle_it 2.195 r_scangle_other 2.194 r_mcangle_other 1.498 r_mcangle_it 1.49 r_scbond_it 1.283 r_scbond_other 1.282 r_angle_other_deg 1.231 r_angle_refined_deg 1.159 r_mcbond_it 0.886 r_mcbond_other 0.806 r_nbd_refined 0.199 r_nbtor_refined 0.164 r_symmetry_nbd_other 0.159 r_symmetry_nbd_refined 0.147 r_nbd_other 0.142 r_xyhbond_nbd_refined 0.102 r_symmetry_nbtor_other 0.079 r_symmetry_xyhbond_nbd_refined 0.078 r_chiral_restr 0.063 r_gen_planes_refined 0.004 r_bond_refined_d 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 923 Nucleic Acid Atoms Solvent Atoms 227 Heterogen Atoms 50
Software Software Software Name Purpose REFMAC refinement XDS data reduction SCALA data scaling