☰ Navigation Tabs
Structure of canine Sec61 inhibited by mycolactone
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3JC2 experimental model PDB 3J7Q
Sample Ribosome-translocon complexes from canine ER microsomes, bound to mycolactone
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details Blot time 5 seconds
Blot force -15
Incubation time 15 seconds
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 45733 Reported Resolution (Å) 2.69 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 (3JC2, 3J7Q) Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 QUANTUM (4k x 4k) Electron Dose (electrons/Å**2) 49
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version CTF CORRECTION CTFFIND 4.1 MODEL FITTING Coot MODEL REFINEMENT PHENIX INITIAL EULER ASSIGNMENT RELION 3 FINAL EULER ASSIGNMENT RELION 3 CLASSIFICATION RELION 3 RECONSTRUCTION RELION 3
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 108129