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Crystal structure of MesI (Lpg2505) from Legionella pneumophila
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 277 200 mM ammonium iodide, 20 % w/v PEG3350
Crystal Properties Matthews coefficient Solvent content 2.46 50.03
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.96 α = 90 b = 56.91 β = 99.61 c = 70.92 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 9M 2018-05-30 M SINGLE WAVELENGTH 2 1 x-ray 100 PIXEL DECTRIS EIGER X 9M 2018-05-30 M SINGLE WAVELENGTH 3 1 x-ray 100 PIXEL DECTRIS EIGER X 9M 2018-07-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 2 0.98 SOLEIL PROXIMA 2 2 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 2 2.0837 SOLEIL PROXIMA 2 3 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 2 1.0386 SOLEIL PROXIMA 2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 44.14 99.6 0.069 0.082 0.998 9.74 3.529 15667 59.807
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.3 98.3 0.96 1.132 0.622 1.25 3.523
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.2 44.14 1.37 15647 783 99.76 0.1872 0.185 0.1897 0.2304 0.2365 62.941
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2215 Nucleic Acid Atoms Solvent Atoms 45 Heterogen Atoms 12
Software Software Software Name Purpose PHENIX refinement XDS data reduction XSCALE data scaling CRANK2 phasing PHASER phasing