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Capsid structure of Penaeus monodon metallodensovirus following EDTA treatment
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 7.416 f_angle_d 0.866 f_chiral_restr 0.067 f_bond_d 0.011 f_plane_restr 0.006
Sample Penaeus monodon metallodensovirus
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 30977 Reported Resolution (Å) 2.78 Resolution Method FSC 3 SIGMA CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry I
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 60
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source OTHER Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION Auto3DEM 4.05.2 CTF CORRECTION Auto3DEM 4.05.2 MODEL REFINEMENT PHENIX RECONSTRUCTION Auto3DEM 4.05.2
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING ONLY