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Cap3G-TAR-F1 is an RNA hairpin. The 1H-1H NOESY data was collected at 308 K in 10 mM KH2PO4 pH 7.4.
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 150 uM Fully protonated Cap3G-TAR-F1, 10 mM Deuterated KH2PO4 100% D2O 10 mM 7.4 1 atm 308 Bruker AVANCE 600 2 2D 1H-1H NOESY 150 uM Fully protonated Cap3G-TAR-F1, 10 mM Deuterated KH2PO4 100% D2O 10 mM 7.4 1 atm 308 Bruker AVANCE 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing distance geometry, molecular dynamics Amber
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 20 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, and Kollman 7 refinement CYANA Guntert, Mumenthaler and Wuthrich 2 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment NMRView Johnson, One Moon Scientific 4 peak picking NMRView Johnson, One Moon Scientific 5 processing NMRFx Johnson, One Moon Scientific 6 data analysis NMRView Johnson, One Moon Scientific