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Crystal structure of erenumab Fab-a
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.5 277 0.2 M ammonium dihydrogen phosphate, 0.1 M Tris, pH 8.5, 50% MPD, 4% 1,3-propanediol
Crystal Properties Matthews coefficient Solvent content 2.86 56.93
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 124.273 α = 90 b = 55.913 β = 110.93 c = 170.086 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKU SATURN 92 VariMax HF 2014-08-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU FR-E SUPERBRIGHT 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 30 97.8 0.068 0.073 0.027 11.2 6.9 58318
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.15 2.23 81.9 0.557 0.629 0.284 0.855 2.38 4.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.15 30 55470 2846 97.68 0.1869 0.1851 0.1916 0.2238 0.2301 RANDOM 46.151
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.29 -0.17 0.31 0.08
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.338 r_dihedral_angle_4_deg 18.191 r_dihedral_angle_3_deg 14.748 r_dihedral_angle_1_deg 6.333 r_angle_refined_deg 1.217 r_angle_other_deg 0.707 r_chiral_restr 0.073 r_bond_refined_d 0.007 r_gen_planes_refined 0.005 r_bond_other_d 0.001
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.338 r_dihedral_angle_4_deg 18.191 r_dihedral_angle_3_deg 14.748 r_dihedral_angle_1_deg 6.333 r_angle_refined_deg 1.217 r_angle_other_deg 0.707 r_chiral_restr 0.073 r_bond_refined_d 0.007 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6683 Nucleic Acid Atoms Solvent Atoms 276 Heterogen Atoms 96
Software Software Software Name Purpose CrystalClear data collection DENZO data reduction HKL-2000 data reduction SCALEPACK data scaling HKL-2000 data scaling PHASER phasing MOLREP phasing REFMAC refinement Coot model building PDB_EXTRACT data extraction