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Structure analysis of full-length mouse bcs1 complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6UKP cryoEM model
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 9 277 Protein was premixed with 2mM ATP-gamma-S and 20 mM MgCl2 incubated for 30 min on ice, then centrifuged and the supernatant was mixed with 100 mM Tris pH 9.0, 100 mM NaCl, 60 mM MgCl2, 15% PEG400
Crystal Properties Matthews coefficient Solvent content 3.83 67.91
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 254.055 α = 90 b = 161.127 β = 107.268 c = 132.595 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2013-04-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.00 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 4.4 50 99.9 0.078 0.034 19.09 6.2 32257
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 4.4 4.56 100 0.306 1.38 5.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE cryoEM 4.4 24.91 1.33 32257 1056 99.72 0.3584 0.3568 0.3746 0.4067 0.4123 258.69
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 15.8983 f_angle_d 0.7977 f_chiral_restr 0.0455 f_plane_restr 0.0042 f_bond_d 0.0035
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 20930 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 196
Software Software Software Name Purpose PHENIX refinement HKL-2000 data reduction HKL-2000 data scaling MOLREP phasing