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C3 symmetric peptide design number 1, Sporty, crystal form 1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 9.5 298 1.0 M sodium potassium tartrate, 0.2 M lithium sulfate, 0.1 M CHES pH 9.5
Crystal Properties Matthews coefficient Solvent content 1.62 24.18
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.5 α = 90 b = 25.01 β = 110.899 c = 35.54 γ = 90
Symmetry Space Group C 1 2/c 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 16M 2018-03-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-E 0.97918 APS 24-ID-E
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.1 21.44 98.9 0.026 0.029 1 24.73 6.312 14892 13.866
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.1 1.13 91.6 0.179 0.202 0.989 5.62 4.771
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION AB INITIO PHASING FREE R-VALUE 1.1 21.43 14415 1442 99.072 0.161 0.1584 0.1583 0.1876 0.1881 14.33
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.504 0.339 -0.508 0.583
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 19.922 r_dihedral_angle_4_deg 14.469 r_dihedral_angle_3_deg 14.278 r_scangle_other 5.984 r_scangle_it 5.886 r_rigid_bond_restr 5.41 r_scbond_other 5.386 r_scbond_it 5.29 r_dihedral_angle_1_deg 4.505 r_lrange_it 3.732
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 19.922 r_dihedral_angle_4_deg 14.469 r_dihedral_angle_3_deg 14.278 r_scangle_other 5.984 r_scangle_it 5.886 r_rigid_bond_restr 5.41 r_scbond_other 5.386 r_scbond_it 5.29 r_dihedral_angle_1_deg 4.505 r_lrange_it 3.732 r_lrange_other 3.638 r_angle_refined_deg 1.667 r_mcangle_other 1.152 r_mcangle_it 1.151 r_mcbond_it 1.013 r_mcbond_other 1.007 r_angle_other_deg 0.533 r_symmetry_nbd_refined 0.206 r_symmetry_nbd_other 0.2 r_nbtor_refined 0.173 r_nbd_refined 0.17 r_nbd_other 0.143 r_symmetry_xyhbond_nbd_refined 0.132 r_xyhbond_nbd_refined 0.125 r_symmetry_nbtor_other 0.088 r_chiral_restr 0.062 r_bond_refined_d 0.018 r_gen_planes_refined 0.016 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 198 Nucleic Acid Atoms Solvent Atoms 28 Heterogen Atoms 5
Software Software Software Name Purpose XDS data reduction XSCALE data scaling REFMAC refinement PDB_EXTRACT data extraction SHELXD phasing