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Crystal structure of FemX
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6.3 291 0.12 M Ethylene Glycol, 0.1 M MES/imidazole pH 6.3 and 28 % Ethylene Glycol-PEG 8000
Crystal Properties Matthews coefficient Solvent content 2.6 52.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 45.01 α = 90 b = 83.62 β = 90 c = 133.93 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M-F 2013-10-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 0.920 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.62 53 99.7 0.065 0.065 0.078 0.031 15.7 6.5 65058 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.62 1.66 0.567 2.6 6.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.62 52.27 61691 3294 99.67 0.2217 0.22088 0.2243 0.23686 0.2423 RANDOM 26.241
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.16 0.81 -0.97
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.159 r_dihedral_angle_4_deg 19.212 r_dihedral_angle_3_deg 13.214 r_dihedral_angle_1_deg 6.06 r_long_range_B_refined 5.339 r_long_range_B_other 5.324 r_scangle_other 4.131 r_scbond_it 2.766 r_scbond_other 2.765 r_mcangle_it 2.511
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.159 r_dihedral_angle_4_deg 19.212 r_dihedral_angle_3_deg 13.214 r_dihedral_angle_1_deg 6.06 r_long_range_B_refined 5.339 r_long_range_B_other 5.324 r_scangle_other 4.131 r_scbond_it 2.766 r_scbond_other 2.765 r_mcangle_it 2.511 r_mcangle_other 2.51 r_mcbond_it 1.758 r_mcbond_other 1.758 r_angle_refined_deg 1.538 r_angle_other_deg 0.824 r_chiral_restr 0.094 r_bond_refined_d 0.013 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3220 Nucleic Acid Atoms Solvent Atoms 177 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling SHELXDE phasing