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Wolinella succinogenes L-asparaginase mutant V23Q,K24T with L-Glu
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 COUNTER-DIFFUSION 293 PEG
Crystal Properties Matthews coefficient Solvent content 2.36 47.82
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 64.76 α = 90 b = 110.29 β = 97.72 c = 89.9 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 S 6M 2018-02-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL41XU 0.8 SPring-8 BL41XU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 40 95.5 5.9227 2.8 80519
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.11
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 30 76386 4055 95.29 0.21759 0.21512 0.26364 0.2643 RANDOM 18.586
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 0.01 -0.06 0.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.236 r_dihedral_angle_4_deg 20.146 r_dihedral_angle_3_deg 14.895 r_dihedral_angle_1_deg 7.342 r_long_range_B_refined 3.505 r_long_range_B_other 3.487 r_scangle_other 2.6 r_mcangle_it 1.845 r_mcangle_other 1.845 r_scbond_it 1.63
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.236 r_dihedral_angle_4_deg 20.146 r_dihedral_angle_3_deg 14.895 r_dihedral_angle_1_deg 7.342 r_long_range_B_refined 3.505 r_long_range_B_other 3.487 r_scangle_other 2.6 r_mcangle_it 1.845 r_mcangle_other 1.845 r_scbond_it 1.63 r_scbond_other 1.629 r_angle_refined_deg 1.529 r_angle_other_deg 1.28 r_mcbond_it 1.193 r_mcbond_other 1.193 r_chiral_restr 0.067 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9466 Nucleic Acid Atoms Solvent Atoms 413 Heterogen Atoms 40
Software Software Software Name Purpose REFMAC refinement iMOSFLM data reduction SCALA data scaling PHASER phasing