☰ Navigation Tabs
Room temperature structure of the fluorescent protein Cerulean recorded after an accumulated dose of 21 kGy
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 293 15% PEG 8000, 0.1M MGCL2, 0.1 M HEPES PH 7.0
Crystal Properties Matthews coefficient Solvent content 2.26 45.67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 51.93 α = 90 b = 63.04 β = 90 c = 71.32 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 PIXEL DECTRIS PILATUS3 6M 2014-12-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 0.976 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.66 47.24 100 0.998 15.43 7.3 28306 33.132
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.66 1.7 100 0.753 7.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.66 47.23 26893 1414 99.93 0.13709 0.13547 0.1501 0.16713 0.1743 RANDOM 34.303
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.1 -0.48 1.57
RMS Deviations Key Refinement Restraint Deviation r_scbond_it 66.762 r_scbond_other 66.73 r_long_range_B_other 50.346 r_long_range_B_refined 50.1 r_scangle_other 44.007 r_dihedral_angle_2_deg 35.972 r_mcbond_it 33.729 r_mcbond_other 33.682 r_mcangle_other 22.106 r_mcangle_it 22.047
RMS Deviations Key Refinement Restraint Deviation r_scbond_it 66.762 r_scbond_other 66.73 r_long_range_B_other 50.346 r_long_range_B_refined 50.1 r_scangle_other 44.007 r_dihedral_angle_2_deg 35.972 r_mcbond_it 33.729 r_mcbond_other 33.682 r_mcangle_other 22.106 r_mcangle_it 22.047 r_dihedral_angle_3_deg 13.244 r_dihedral_angle_4_deg 10.857 r_dihedral_angle_1_deg 6.508 r_angle_refined_deg 1.537 r_angle_other_deg 0.765 r_chiral_restr 0.093 r_bond_refined_d 0.011 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1805 Nucleic Acid Atoms Solvent Atoms 155 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling PHASER phasing