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Bacteroides uniformis endo-laminarinase BuGH158 from the beta(1,3)-glucan utilization locus
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 298 1 M bicine pH 9.0
1.6 M ammonium sulfate
Crystal Properties Matthews coefficient Solvent content 2.43 49.29
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.675 α = 90 b = 106.03 β = 90 c = 126.977 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2018-11-30 M SINGLE WAVELENGTH
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.818 40.726 100 0.113 0.117 0.032 0.999 14.8 13 80471
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.818 1.849 1.479 1.56 0.49 0.69 1.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MAD FREE R-VALUE 1.818 40.726 80470 4004 99.986 0.171 0.1693 0.1693 0.2058 0.2059 27.169
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.353 -0.588 -0.765
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.565 r_dihedral_angle_4_deg 20.576 r_dihedral_angle_3_deg 12.281 r_dihedral_angle_1_deg 7.351 r_lrange_it 6.046 r_lrange_other 5.956 r_scangle_it 4.734 r_scangle_other 4.73 r_mcangle_it 3.102 r_mcangle_other 3.102
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.565 r_dihedral_angle_4_deg 20.576 r_dihedral_angle_3_deg 12.281 r_dihedral_angle_1_deg 7.351 r_lrange_it 6.046 r_lrange_other 5.956 r_scangle_it 4.734 r_scangle_other 4.73 r_mcangle_it 3.102 r_mcangle_other 3.102 r_scbond_it 3.084 r_scbond_other 3.08 r_angle_other_deg 2.335 r_mcbond_it 2.208 r_mcbond_other 2.206 r_angle_refined_deg 1.561 r_symmetry_nbd_refined 0.29 r_symmetry_xyhbond_nbd_refined 0.279 r_nbd_other 0.239 r_symmetry_nbd_other 0.207 r_nbd_refined 0.199 r_nbtor_refined 0.169 r_xyhbond_nbd_refined 0.145 r_chiral_restr 0.072 r_symmetry_nbtor_other 0.071 r_bond_other_d 0.036 r_gen_planes_other 0.014 r_bond_refined_d 0.01 r_gen_planes_refined 0.009 r_symmetry_xyhbond_nbd_other 0.009
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6302 Nucleic Acid Atoms Solvent Atoms 655 Heterogen Atoms 21
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling AutoSol phasing