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Structure of WHB in complex with Ubiquitin Variant
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5 mM [U-99% 13C; U-99% 15N] WHB, 0.6 mM Ubiquitin Variant 90% H2O/10% D2O 100 mM 7 atmospheric atm 308 Bruker AVANCE III 700 2 2D 1H-13C HSQC aliphatic 0.5 mM [U-99% 13C; U-99% 15N] WHB, 0.6 mM Ubiquitin Variant 90% H2O/10% D2O 100 mM 7 atmospheric atm 308 Bruker AVANCE III 800 3 2D 1H-13C HSQC aromatic 0.5 mM [U-99% 13C; U-99% 15N] WHB, 0.6 mM Ubiquitin Variant 90% H2O/10% D2O 100 mM 7 atmospheric atm 308 Bruker AVANCE III 800 4 3D CBCA(CO)NH 0.5 mM [U-99% 13C; U-99% 15N] WHB, 0.6 mM Ubiquitin Variant 90% H2O/10% D2O 100 mM 7 atmospheric atm 308 Bruker AVANCE III 600 5 3D HNCACB 0.5 mM [U-99% 13C; U-99% 15N] WHB, 0.6 mM Ubiquitin Variant 90% H2O/10% D2O 100 mM 7 atmospheric atm 308 Bruker AVANCE III 600 7 3D HNCA 0.5 mM [U-99% 13C; U-99% 15N] WHB, 0.6 mM Ubiquitin Variant 90% H2O/10% D2O 100 mM 7 atmospheric atm 308 Bruker AVANCE III 700 6 3D HCCH-TOCSY 0.5 mM [U-99% 13C; U-99% 15N] WHB, 0.6 mM Ubiquitin Variant 90% H2O/10% D2O 100 mM 7 atmospheric atm 308 Bruker AVANCE III 600 8 3D 1H-15N NOESY 0.5 mM [U-99% 13C; U-99% 15N] WHB, 0.6 mM Ubiquitin Variant 90% H2O/10% D2O 100 mM 7 atmospheric atm 308 Bruker AVANCE III 600 9 3D 1H-13C NOESY aliphatic 0.5 mM [U-99% 13C; U-99% 15N] WHB, 0.6 mM Ubiquitin Variant 90% H2O/10% D2O 100 mM 7 atmospheric atm 308 Bruker AVANCE III 700 10 3D 1H-13C NOESY aromatic 0.5 mM [U-99% 13C; U-99% 15N] WHB, 0.6 mM Ubiquitin Variant 90% H2O/10% D2O 100 mM 7 atmospheric atm 308 Bruker AVANCE III 600 11 3D 1H-13C filtered NOESY 0.5 mM [U-99% 13C; U-99% 15N] WHB, 0.6 mM Ubiquitin Variant 90% H2O/10% D2O 100 mM 7 atmospheric atm 308 Bruker AVANCE III 600 12 3D HBHA(CO)NH 0.5 mM [U-99% 13C; U-99% 15N] WHB, 0.6 mM Ubiquitin Variant 90% H2O/10% D2O 100 mM 7 atmospheric atm 308 Bruker AVANCE III 600 13 2D 1H-15N HSQC Bruker AVANCE III 700 14 2D 1H-13C HSQC aliphatic Bruker AVANCE III 700 15 2D 1H-13C HSQC aromatic Bruker AVANCE III 700 17 3D HNCA Bruker AVANCE III 600 16 3D HNCACB Bruker AVANCE III 600 18 3D HBHA(CO)NH Bruker AVANCE III 800 19 3D 1H-15N NOESY Bruker AVANCE III 600 20 3D 1H-13C NOESY aliphatic Bruker AVANCE III 700 21 3D 1H-13C NOESY aromatic Bruker AVANCE III 700 22 3D H(CCO)NH Bruker AVANCE III 600 23 3D 1H-13C filtered NOESY Bruker AVANCE III 700
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600 2 Bruker AVANCE III 700 3 Bruker AVANCE III 800
NMR Refinement Method Details Software torsion angle dynamics Structures from cyana were minimized with CNS CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 400 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 4 processing TopSpin Bruker Biospin 5 chemical shift assignment CARA Keller and Wuthrich 6 peak picking CARA Keller and Wuthrich 7 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 1 refinement CYANA Guntert, Mumenthaler and Wuthrich 2 refinement CNS