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B. pseudomallei KatG crystallized in the presence of furoyl hydrazide
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1MWV PDBID 1MWV
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.1 293 MPD, 0.1 M sodium citrate, 50 mM furoyl hydrazide
Crystal Properties Matthews coefficient Solvent content 3.25 62.15
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 100.46 α = 90 b = 115.43 β = 90 c = 174.6 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD mirrors 2009-07-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08ID-1 0.98 CLSI 08ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 35.209 99.9 0.098 0.109 0.047 11 5.2 159840 159840
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Rrim I (All) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 2 99.9 0.48 0.48 0.537 0.239 1.5 5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDBID 1MWV 1.9 35.209 151873 7870 99.91 0.1461 0.1447 0.1565 0.1739 0.1833 RANDOM 22.059
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.97 1.56 -0.59
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.165 r_dihedral_angle_4_deg 17.534 r_dihedral_angle_3_deg 12.764 r_dihedral_angle_1_deg 6.694 r_angle_refined_deg 1.53 r_angle_other_deg 1.458 r_chiral_restr 0.08 r_gen_planes_refined 0.017 r_bond_refined_d 0.011 r_gen_planes_other 0.011
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.165 r_dihedral_angle_4_deg 17.534 r_dihedral_angle_3_deg 12.764 r_dihedral_angle_1_deg 6.694 r_angle_refined_deg 1.53 r_angle_other_deg 1.458 r_chiral_restr 0.08 r_gen_planes_refined 0.017 r_bond_refined_d 0.011 r_gen_planes_other 0.011 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10998 Nucleic Acid Atoms Solvent Atoms 1559 Heterogen Atoms 122
Software Software Software Name Purpose SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction MOSFLM data reduction REFMAC phasing