6MK8

NMR structure of Database designed and improved anti-Staphylococcal peptide DFT503 bound to micelles

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-1H NOESY	2 mM DFT503, 122 mM SDS	90% H2O/10% D2O	Not defined	5.5	1 atm	298	Bruker AVANCE 600
2	2D 1H-1H TOCSY	2 mM DFT503, 122 mM SDS	90% H2O/10% D2O	Not defined	5.5	1 atm	298	Bruker AVANCE 600
3	2D 1H-15N HSQC	2 mM DFT503, 122 mM SDS	90% H2O/10% D2O	Not defined	5.5	1 atm	298	Bruker AVANCE 600
4	2D 1H-13C HSQC	2 mM DFT503, 122 mM SDS	90% H2O/10% D2O	Not defined	5.5	1 atm	298	Bruker AVANCE 600
5	2D DQF-COSY	2 mM DFT503, 122 mM SDS	90% H2O/10% D2O	Not defined	5.5	1 atm	298	Bruker AVANCE 600

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	600

NMR Refinement
Method	Details	Software
simulated annealing		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	5
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	CNS		Brunger A. T. et.al.
2	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
3	chemical shift assignment	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4	peak picking	PIPP		Garrett
5	structure calculation	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.