☰ Navigation Tabs
Human serum albumin-Palmitic acid-Cu compound
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1E7H
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 293 PEG3350, 50 mM potassium phosphate (pH 7.5), 5% glycerol, and 4% DMSO.
Crystal Properties Matthews coefficient Solvent content 2.48 50.4
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.356 α = 74.89 b = 93.523 β = 89.68 c = 96.359 γ = 80.04
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 CCD Nonius Kappa CCD 2018-11-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL17U 1 SSRF BL17U
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.09 46.53 97.91 0.051 14.2 3.6 63319
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.09 2.139 0.056
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1E7H 2.09 46.53 1 63319 3379 97.91 0.2385 0.2358 0.2353 0.2898 0.2832 RANDOM 44.52
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.02 -0.15 0.01 0.25 0.04 -0.27
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.193 r_dihedral_angle_4_deg 23.098 r_dihedral_angle_3_deg 19.046 r_dihedral_angle_1_deg 6.398 r_angle_refined_deg 1.731 r_angle_other_deg 1.074 r_chiral_restr 0.096 r_bond_refined_d 0.014 r_gen_planes_refined 0.007 r_bond_other_d 0.002
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.193 r_dihedral_angle_4_deg 23.098 r_dihedral_angle_3_deg 19.046 r_dihedral_angle_1_deg 6.398 r_angle_refined_deg 1.731 r_angle_other_deg 1.074 r_chiral_restr 0.096 r_bond_refined_d 0.014 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8886 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 220
Software Software Software Name Purpose PHENIX refinement HKL-2000 data scaling MOLREP phasing HKL-2000 data reduction