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Viral Ubiquitin from Autographa californica Nucleo Polyhedrosis Virus
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.7 mM [U-99% 13C; U-99% 15N] Viral Ubiquitin protein 90% H2O/10% D2O 25 mM 5.0 1 atm 298 Bruker AVANCE III 600 2 3D HNCA 0.7 mM [U-99% 13C; U-99% 15N] Viral Ubiquitin protein 90% H2O/10% D2O 25 mM 5.0 1 atm 298 Bruker AVANCE III 600 3 3D HNCACB 0.7 mM [U-99% 13C; U-99% 15N] Viral Ubiquitin protein 90% H2O/10% D2O 25 mM 5.0 1 atm 298 Bruker AVANCE III 600 4 3D HNCO 0.7 mM [U-99% 13C; U-99% 15N] Viral Ubiquitin protein 90% H2O/10% D2O 25 mM 5.0 1 atm 298 Bruker AVANCE III 600 5 3D CBCA(CO)NH 0.7 mM [U-99% 13C; U-99% 15N] Viral Ubiquitin protein 90% H2O/10% D2O 25 mM 5.0 1 atm 298 Bruker AVANCE III 600 8 3D HN(CO)CA 0.7 mM [U-99% 13C; U-99% 15N] Viral Ubiquitin protein 90% H2O/10% D2O 25 mM 5.0 1 atm 298 Bruker AVANCE III 600 7 3D H(CCO)NH 0.7 mM [U-99% 13C; U-99% 15N] Viral Ubiquitin protein 90% H2O/10% D2O 25 mM 5.0 1 atm 298 Bruker AVANCE III 600 6 3D C(CO)NH 0.7 mM [U-99% 13C; U-99% 15N] Viral Ubiquitin protein 90% H2O/10% D2O 25 mM 5.0 1 atm 298 Bruker AVANCE III 600 9 3D HCCH-TOCSY 0.7 mM [U-99% 13C; U-99% 15N] Viral Ubiquitin protein 90% H2O/10% D2O 25 mM 5.0 1 atm 298 Bruker AVANCE III 600 12 3D HCCH-COSY 0.7 mM [U-99% 13C; U-99% 15N] Viral Ubiquitin protein 90% H2O/10% D2O 25 mM 5.0 1 atm 298 Bruker AVANCE III 600 10 3D 1H-15N NOESY 0.7 mM [U-99% 13C; U-99% 15N] Viral Ubiquitin protein 90% H2O/10% D2O 25 mM 5.0 1 atm 298 Bruker AVANCE III 600 11 3D 1H-13C NOESY 0.7 mM [U-99% 13C; U-99% 15N] Viral Ubiquitin protein 90% H2O/10% D2O 25 mM 5.0 1 atm 298 Bruker AVANCE III 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600
NMR Refinement Method Details Software torsion angle dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment Sparky Goddard 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 4 chemical shift assignment PINE Bahrami, Markley, Assadi, and Eghbalnia 5 refinement CYANA Guntert, Mumenthaler and Wuthrich