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Solution structure of translationally controlled tumor protein from photosynthetic microalga Nannochloropsis oceanica
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 1 mM [U-13C; U-15N] NoTCTP, 50 mM sodium phosphate, 200 mM potassium chloride, 5 mM DTT, 5 mM EDTA, 0.02 % w/v sodium azide, 0.01 % w/v DSS 90% H2O/10% D2O 250 mM 7.8 1 atm 308 Bruker AVANCE III 600 2 3D 1H-13C NOESY aliphatic 1 mM [U-13C; U-15N] NoTCTP, 50 mM sodium phosphate, 200 mM potassium chloride, 5 mM DTT, 5 mM EDTA, 0.02 % w/v sodium azide, 0.01 % w/v DSS 90% H2O/10% D2O 250 mM 7.8 1 atm 308 Bruker AVANCE III 600 3 3D 1H-13C NOESY aromatic 1 mM [U-13C; U-15N] NoTCTP, 50 mM sodium phosphate, 200 mM potassium chloride, 5 mM DTT, 5 mM EDTA, 0.02 % w/v sodium azide, 0.01 % w/v DSS 90% H2O/10% D2O 250 mM 7.8 1 atm 308 Bruker AVANCE III 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600
NMR Refinement Method Details Software simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read 2 structure calculation CNS Brunger, Adams, Clore, Gros, Nilges and Read 3 chemical shift assignment NMRView Johnson, One Moon Scientific 4 peak picking NMRView Johnson, One Moon Scientific