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C-terminal truncated KsgA from Bacillus subtilis 168
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 0.1M HEPES sodium pH 7.5, 1.4M Sodium citrate tribasic dihydrate
Crystal Properties Matthews coefficient Solvent content 2.27 45.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 77.867 α = 90 b = 77.867 β = 90 c = 143.638 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2015-12-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX2 0.98 Australian Synchrotron MX2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.1 47.8 99.8 0.178 13.1 12.2 8452
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.11 3.11 99.2 0.727 3.7 12.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 3.11 19.877 7311 1046 99.3 0.19691 0.18574 0.1903 0.274 0.2675 RANDOM 54.943
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.09 -0.09 0.17
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.302 r_dihedral_angle_4_deg 16.72 r_dihedral_angle_3_deg 15.014 r_long_range_B_refined 8.236 r_long_range_B_other 8.231 r_dihedral_angle_1_deg 6.873 r_mcangle_it 5.978 r_mcangle_other 5.977 r_scangle_other 5.408 r_mcbond_other 3.717
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.302 r_dihedral_angle_4_deg 16.72 r_dihedral_angle_3_deg 15.014 r_long_range_B_refined 8.236 r_long_range_B_other 8.231 r_dihedral_angle_1_deg 6.873 r_mcangle_it 5.978 r_mcangle_other 5.977 r_scangle_other 5.408 r_mcbond_other 3.717 r_mcbond_it 3.716 r_scbond_it 3.315 r_scbond_other 3.313 r_angle_refined_deg 1.552 r_angle_other_deg 0.994 r_chiral_restr 0.079 r_bond_refined_d 0.012 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3058 Nucleic Acid Atoms Solvent Atoms 10 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling Auto-Rickshaw phasing