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Complex of Ovine Serum Albumin with diclofenac
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4LUF
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.25 293 Tacsimate, PEG 400
Crystal Properties Matthews coefficient Solvent content 3.9 68.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 121.68 α = 90 b = 121.68 β = 90 c = 121.77 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M mirrors 2013-07-31 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) 0.9763 PETRA III, EMBL c/o DESY P14 (MX2)
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.12 50 98.9 0.13 0.999 14.59 9.1 58784 45.095
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.12 2.22 97.2 1.427 0.706 2.06 8.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 4LUF 2.12 48.36 55842 2941 98.88 0.16721 0.16476 0.1653 0.21377 0.2143 RANDOM 45.176
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.87 0.43 0.87 -2.82
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.142 r_dihedral_angle_4_deg 20.253 r_dihedral_angle_3_deg 16.831 r_long_range_B_refined 10.037 r_dihedral_angle_1_deg 5.957 r_scbond_it 3.934 r_mcangle_it 2.987 r_angle_refined_deg 2.032 r_mcbond_it 2.021 r_chiral_restr 0.139
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.142 r_dihedral_angle_4_deg 20.253 r_dihedral_angle_3_deg 16.831 r_long_range_B_refined 10.037 r_dihedral_angle_1_deg 5.957 r_scbond_it 3.934 r_mcangle_it 2.987 r_angle_refined_deg 2.032 r_mcbond_it 2.021 r_chiral_restr 0.139 r_bond_refined_d 0.021 r_gen_planes_refined 0.01 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4645 Nucleic Acid Atoms Solvent Atoms 566 Heterogen Atoms 182
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction XDS data scaling PHASER phasing