6G5S
Solution structure of the TPR domain of the cell division coordinator, CpoB
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 2 mM [U-13C; U-15N] CpoB | 90% H2O and 10% D2O | 200 mM | 7.5 | 1 atm | 293 | Bruker AVANCE 700 |
2 | 3D HNCO | 2 mM [U-13C; U-15N] CpoB | 90% H2O and 10% D2O | 200 mM | 7.5 | 1 atm | 293 | Bruker AVANCE 700 |
3 | 3D HN(CA)CO | 2 mM [U-13C; U-15N] CpoB | 90% H2O and 10% D2O | 200 mM | 7.5 | 1 atm | 293 | Bruker AVANCE 700 |
4 | 3D BESTROSY-HNCACB | 2 mM [U-13C; U-15N] CpoB | 90% H2O and 10% D2O | 200 mM | 7.5 | 1 atm | 293 | Bruker AVANCE 850 |
5 | 3D BESTROSY-HN(CO)CACB | 2 mM [U-13C; U-15N] CpoB | 90% H2O and 10% D2O | 200 mM | 7.5 | 1 atm | 293 | Bruker AVANCE 850 |
6 | 2D 1H-13C HSQC aliphatic | 2 mM [U-13C; U-15N] CpoB | 90% H2O and 10% D2O | 200 mM | 7.5 | 1 atm | 293 | Bruker AVANCE 700 |
7 | 2D 1H-13C HSQC aromatic | 2 mM [U-13C; U-15N] CpoB | 90% H2O and 10% D2O | 200 mM | 7.5 | 1 atm | 293 | Bruker AVANCE 700 |
8 | 3D HCCH-TOCSY | 2 mM [U-13C; U-15N] CpoB | 90% H2O and 10% D2O | 200 mM | 7.5 | 1 atm | 293 | Bruker AVANCE 850 |
9 | 3D HCCH-TOCSY | 2 mM [U-13C; U-15N] CpoB | 90% H2O and 10% D2O | 200 mM | 7.5 | 1 atm | 293 | Bruker AVANCE 850 |
10 | 3D 1H-15N NOESY | 2 mM [U-13C; U-15N] CpoB | 90% H2O and 10% D2O | 200 mM | 7.5 | 1 atm | 293 | Bruker US2 950 |
11 | 3D 1H-13C NOESY aliphatic | 2 mM [U-13C; U-15N] CpoB | 90% H2O and 10% D2O | 200 mM | 7.5 | 1 atm | 293 | Bruker AVANCE 850 |
12 | 3D 1H-13C NOESY aromatic | 2 mM [U-13C; U-15N] CpoB | 90% H2O and 10% D2O | 200 mM | 7.5 | 1 atm | 293 | Bruker AVANCE 850 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
2 | Bruker | AVANCE | 700 |
3 | Bruker | AVANCE | 850 |
4 | Bruker | US2 | 950 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | 20 |
Conformers Calculated Total Number | 750 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure calculation | ARIA | 2.3 | Rieping W., Habeck M., Bardiaux B., Bernard A , Nilges M. |
2 | refinement | CNS | 1.2 | Brunger, Adams, Clore, Gros, Nilges and Read |
3 | chemical shift assignment | CcpNmr Analysis | 2.4 | CCPN |
4 | data analysis | TALOS+ | Yang Shen, Frank Delaglio, Gabriel Cornilescu, and Ad Bax | |
5 | structure calculation | UNIO | 2.0.2 | Torsten Herrmann |
6 | data analysis | NMRDraw | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
7 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |