6G4K
The solution NMR structure of brevinin-1BYa in sodium dodecyl sulphate micelles
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 1.5 mM NA- Brevinin-1BYa | 90% H2O/10% D2O | 0 M | 7 | 100000 Pa | 298 | Bruker AVANCE DRX 500 |
2 | 2D 1H-1H NOESY | 1.5 mM NA- Brevinin-1BYa | 90% H2O/10% D2O | 0 M | 7 | 100000 Pa | 298 | Bruker AVANCE DRX 500 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE DRX | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | CYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (medoid) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
5 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
2 | refinement | NAMD | NIH CENTER FOR MACROMOLECULAR MODELING & BIOINFORMATICS | |
3 | chemical shift assignment | NMRFAM-SPARKY | NMRFAM | |
4 | peak picking | NMRFAM-SPARKY | NMRFAM |