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Crystal structure of a putative acetyltransferase from Bacillus cereus species.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 298 30%PEG 6000
100mM Hepes pH7.0
1M LiCl
10 mM BME
Crystal Properties Matthews coefficient Solvent content 2.11 41.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 68.52 α = 90 b = 84.17 β = 98.49 c = 72.08 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2010-09-07 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 0.9795 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.92 83.97 100 0.09 0.104 0.053 15.5 7.5 60997
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.92 1.97 100 0.716 0.834 0.425 2.9 7.5 4505
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2 44.97 51832 2770 99.73 0.1657 0.16383 0.164 0.20103 0.2014 RANDOM 28.07
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.04 0.17 -0.09 0.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.538 r_dihedral_angle_4_deg 20.29 r_dihedral_angle_3_deg 14.623 r_dihedral_angle_1_deg 6.693 r_long_range_B_refined 6.45 r_long_range_B_other 6.248 r_scangle_other 4.257 r_mcangle_other 3.009 r_mcangle_it 3.007 r_scbond_it 2.674
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.538 r_dihedral_angle_4_deg 20.29 r_dihedral_angle_3_deg 14.623 r_dihedral_angle_1_deg 6.693 r_long_range_B_refined 6.45 r_long_range_B_other 6.248 r_scangle_other 4.257 r_mcangle_other 3.009 r_mcangle_it 3.007 r_scbond_it 2.674 r_scbond_other 2.67 r_angle_refined_deg 2.099 r_mcbond_it 1.874 r_mcbond_other 1.868 r_angle_other_deg 1.117 r_chiral_restr 0.146 r_bond_refined_d 0.022 r_gen_planes_refined 0.011 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5426 Nucleic Acid Atoms Solvent Atoms 531 Heterogen Atoms 51
Software Software Software Name Purpose REFMAC refinement xia2 data reduction SCALA data scaling PHENIX phasing