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mouse TCR I.29 in complex with IAg7-p8E9E6ss
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 298 12% PEG 20000, 100mM bicine pH9.0, 20% ethylene glycol
Crystal Properties Matthews coefficient Solvent content 4.95 75.14
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 269.518 α = 90 b = 269.518 β = 90 c = 45.639 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 6M 2014-04-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-E 0.9790 APS 24-ID-E
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.1 50 99.7 24.4 6.3 32259
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.1 3.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 3.1 50.01 32259 1713 96.06 0.24197 0.23964 0.2443 0.28515 0.285 RANDOM 68.541
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.47 0.23 0.47 -1.52
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.335 r_dihedral_angle_3_deg 22.918 r_dihedral_angle_4_deg 19.817 r_long_range_B_refined 13.612 r_long_range_B_other 13.612 r_dihedral_angle_1_deg 11.419 r_mcangle_it 10.024 r_mcangle_other 10.022 r_scangle_other 9.016 r_mcbond_it 6.172
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.335 r_dihedral_angle_3_deg 22.918 r_dihedral_angle_4_deg 19.817 r_long_range_B_refined 13.612 r_long_range_B_other 13.612 r_dihedral_angle_1_deg 11.419 r_mcangle_it 10.024 r_mcangle_other 10.022 r_scangle_other 9.016 r_mcbond_it 6.172 r_mcbond_other 6.165 r_scbond_it 5.366 r_scbond_other 5.366 r_angle_refined_deg 2.096 r_angle_other_deg 1.191 r_chiral_restr 0.113 r_bond_refined_d 0.017 r_gen_planes_refined 0.009 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6221 Nucleic Acid Atoms Solvent Atoms 19 Heterogen Atoms 14
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling PHASER phasing