6C8U
Solution structure of Musashi2 RRM1
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.5 mM [U-90% 15N] MSI2-RRM1 | 95% H2O/5% D2O | 150 mM NaCl mM | 6.0 | 1 atm | 298 | Bruker AVANCE 800 |
11 | 2D 1H-15N HSQC | 0.5 mM [U-90% 15N] MSI2-RRM1 | 95% H2O/5% D2O | 150 mM NaCl mM | 6.0 | 1 atm | 298 | Bruker AVANCE III 600 |
2 | 3D CBCA(CO)NH | 0.7 mM [U-95% 13C; U-90% 15N] MSI2-RRM1 | 95% H2O/5% D2O | 150 mM NaCl mM | 6.0 | 1 atm | 298 | Bruker AVANCE 800 |
3 | 3D HCCH-TOCSY | 0.7 mM [U-95% 13C; U-90% 15N] MSI2-RRM1 | 95% H2O/5% D2O | 150 mM NaCl mM | 6.0 | 1 atm | 298 | Bruker AVANCE 800 |
12 | 3D HCCH-COSY | 0.7 mM [U-95% 13C; U-90% 15N] MSI2-RRM1 | 95% H2O/5% D2O | 150 mM NaCl mM | 6.0 | 1 atm | 298 | Bruker AVANCE 800 |
4 | 3D HNCACB | 0.7 mM [U-95% 13C; U-90% 15N] MSI2-RRM1 | 95% H2O/5% D2O | 150 mM NaCl mM | 6.0 | 1 atm | 298 | Bruker AVANCE 800 |
5 | 3D HNCA | 0.7 mM [U-95% 13C; U-90% 15N] MSI2-RRM1 | 95% H2O/5% D2O | 150 mM NaCl mM | 6.0 | 1 atm | 298 | Bruker AVANCE 800 |
6 | 3D HNCO | 0.7 mM [U-95% 13C; U-90% 15N] MSI2-RRM1 | 95% H2O/5% D2O | 150 mM NaCl mM | 6.0 | 1 atm | 298 | Bruker AVANCE 800 |
7 | 3D HN(CO)CA | 0.7 mM [U-95% 13C; U-90% 15N] MSI2-RRM1 | 95% H2O/5% D2O | 150 mM NaCl mM | 6.0 | 1 atm | 298 | Bruker AVANCE 800 |
8 | 3D HNCACO | 0.7 mM [U-95% 13C; U-90% 15N] MSI2-RRM1 | 95% H2O/5% D2O | 150 mM NaCl mM | 6.0 | 1 atm | 298 | Bruker AVANCE 800 |
9 | 3D 1H-15N NOESY | 0.7 mM [U-95% 13C; U-90% 15N] MSI2-RRM1 | 95% H2O/5% D2O | 150 mM NaCl mM | 6.0 | 1 atm | 298 | Bruker AVANCE 800 |
10 | 3D 1H-13C NOESY | 0.7 mM [U-95% 13C; U-90% 15N] MSI2-RRM1 | 95% H2O/5% D2O | 150 mM NaCl mM | 6.0 | 1 atm | 298 | Bruker AVANCE 800 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
2 | Bruker | AVANCE III | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | CNS |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | CNS | 1.3 | Brunger, Adams, Clore, Gros, Nilges and Read |
2 | structure calculation | CNS | 1.3 | Brunger, Adams, Clore, Gros, Nilges and Read |
3 | chemical shift assignment | CcpNMR | CCPN | |
4 | peak picking | CcpNMR | CCPN | |
5 | peak picking | NMRView | Johnson, One Moon Scientific | |
6 | collection | TopSpin | 2.1pl6 | Bruker Biospin |
7 | data analysis | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
8 | data analysis | NMRDraw | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |