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Solution structure of translation initiation factor 1 from Clostridium difficile
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1 mM [U-99% 15N] 15N_pET24bCdIF1 90% H2O/10% D2O 0.12 M 5.1 1 atm 298 Bruker AVANCE 600 2 3D 1H-15N NOESY 1 mM [U-99% 15N] 15N_pET24bCdIF1 90% H2O/10% D2O 0.12 M 5.1 1 atm 298 Bruker AVANCE 600 3 3D HNCACB 1 mM [U-99% 13C; U-99% 15N] 13C_15N_pET24bCdIF1 90% H2O/10% D2O 0.12 M 5.1 1 atm 298 Bruker AVANCE 600 4 3D CBCA(CO)NH 1 mM [U-99% 13C; U-99% 15N] 13C_15N_pET24bCdIF1 90% H2O/10% D2O 0.12 M 5.1 1 atm 298 Bruker AVANCE 600 5 3D HNCO 1 mM [U-99% 13C; U-99% 15N] 13C_15N_pET24bCdIF1 90% H2O/10% D2O 0.12 M 5.1 1 atm 298 Bruker AVANCE 600 6 3D HBHA(CO)NH 1 mM [U-99% 13C; U-99% 15N] 13C_15N_pET24bCdIF1 90% H2O/10% D2O 0.12 M 5.1 1 atm 298 Bruker AVANCE 600 7 3D H(CCO)NH 1 mM [U-99% 13C; U-99% 15N] 13C_15N_pET24bCdIF1 90% H2O/10% D2O 0.12 M 5.1 1 atm 298 Bruker AVANCE 600 8 3D C(CO)NH 1 mM [U-99% 13C; U-99% 15N] 13C_15N_pET24bCdIF1 90% H2O/10% D2O 0.12 M 5.1 1 atm 298 Bruker AVANCE 600 9 2D 1H-13C HSQC aliphatic 1 mM [U-99% 13C; U-99% 15N] 13C_15N_pET24bCdIF1 100% D2O 0.12 M 5.1 1 atm 298 Bruker AVANCE 700 10 3D HCCH-TOCSY 1 mM [U-99% 13C; U-99% 15N] 13C_15N_pET24bCdIF1 100% D2O 0.12 M 5.1 1 atm 298 Bruker AVANCE 700 11 3D 1H-13C NOESY aliphatic 1 mM [U-99% 13C; U-99% 15N] 13C_15N_pET24bCdIF1 100% D2O 0.12 M 5.1 1 atm 298 Bruker AVANCE 700
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 700
NMR Refinement Method Details Software simulated annealing the structurea are based on a total of 999 restraints, 854 NOE, 112 dihedral angle restraints, 33 hydrogen bonds xplor-NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 15 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement xplor-NIH G. Marius Clore , Guillermo Bermejo, , John Kuszewski, Charles D. Schwieters, and Nico Tjandra 2 structure calculation xplor-NIH G. Marius Clore , Guillermo Bermejo, , John Kuszewski, Charles D. Schwieters, and Nico Tjandra 3 chemical shift assignment Sparky Goddard 4 peak picking Sparky Goddard