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Crystal structure of the HopQ-CEACAM3 L44Q complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 298 20% w/v PEG 3000, 0.1 M Bis-Tris-HCl, pH 6.5, 0.2 M calcium acetate, 1 % v/v glycerol
Crystal Properties Matthews coefficient Solvent content 1.9 35.22
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.83 α = 90 b = 102.594 β = 90 c = 112.65 γ = 90
Symmetry Space Group P 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M Rh coated flat bent M0, toroidal focusing post-monochromator M1 2017-02-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-2 0.979460 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.66 102.59 99.3 0.12 0.081 10.7 5.6 13470
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.66 2.79 96.3 1.179 0.841 1.3 5.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.66 102.59 12792 661 99.15 0.2448 0.24209 0.2435 0.29682 0.2987 RANDOM 53.141
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.86 -2.45 0.58
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.41 r_dihedral_angle_3_deg 13.459 r_dihedral_angle_4_deg 11.929 r_dihedral_angle_1_deg 6.283 r_long_range_B_refined 3.132 r_long_range_B_other 3.132 r_mcangle_it 1.64 r_mcangle_other 1.64 r_scangle_other 1.141 r_angle_refined_deg 1.14
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.41 r_dihedral_angle_3_deg 13.459 r_dihedral_angle_4_deg 11.929 r_dihedral_angle_1_deg 6.283 r_long_range_B_refined 3.132 r_long_range_B_other 3.132 r_mcangle_it 1.64 r_mcangle_other 1.64 r_scangle_other 1.141 r_angle_refined_deg 1.14 r_angle_other_deg 0.9 r_mcbond_it 0.893 r_mcbond_other 0.893 r_scbond_it 0.606 r_scbond_other 0.606 r_chiral_restr 0.063 r_bond_refined_d 0.007 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3367 Nucleic Acid Atoms Solvent Atoms 8 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling MOLREP phasing