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Acid-tolerant monomeric GFP, Gamillus, fluorescence (ON) state
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 298 Ammonium phosphate, sodium citrate, sodium chloride, HEPES, pH5.5
Crystal Properties Matthews coefficient Solvent content 5.74 78.55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 161.158 α = 90 b = 161.158 β = 90 c = 161.158 γ = 90
Symmetry Space Group I 21 3
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX-300 2016-06-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL44XU 0.900 SPring-8 BL44XU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 114 99.9 0.073 23.8 7.6 90910
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.6 1.63 0.647
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.6 113.96 86693 4514 99.8 0.14595 0.14531 0.159 0.15831 0.1719 RANDOM 15.649
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.321 r_dihedral_angle_4_deg 15.003 r_dihedral_angle_3_deg 11.445 r_dihedral_angle_1_deg 7.01 r_long_range_B_refined 6.476 r_long_range_B_other 6.255 r_scangle_other 5.136 r_scbond_it 3.6 r_scbond_other 3.599 r_angle_refined_deg 3.332
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.321 r_dihedral_angle_4_deg 15.003 r_dihedral_angle_3_deg 11.445 r_dihedral_angle_1_deg 7.01 r_long_range_B_refined 6.476 r_long_range_B_other 6.255 r_scangle_other 5.136 r_scbond_it 3.6 r_scbond_other 3.599 r_angle_refined_deg 3.332 r_mcangle_it 2.376 r_mcangle_other 2.376 r_mcbond_it 1.68 r_mcbond_other 1.674 r_angle_other_deg 1.395 r_chiral_restr 0.191 r_bond_refined_d 0.039 r_gen_planes_refined 0.021 r_gen_planes_other 0.005 r_bond_other_d 0.003 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1813 Nucleic Acid Atoms Solvent Atoms 269 Heterogen Atoms 12
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling MOLREP phasing