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Deoxy form of sperm whale myoglobin V68A/I107Y
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 294 0.1 M Tris-HCl, 1 mM EDTA, pH 7.4
2.56 M Ammonium Sulfate
Crystal Properties Matthews coefficient Solvent content 1.9 35.12
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 34.454 α = 90 b = 30.565 β = 105.58 c = 63.811 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 200K 2013-11-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF 1.54178
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 31 99 0.046 0.056 0.031 39.5 3 12004
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.83 94.3 0.07 0.089 0.054 0.986 2.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.8 26.37 11396 601 98.9 0.1887 0.1856 0.2504 0.2865 RANDOM 23.633
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.34 -0.41 0.96 -0.44
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.092 r_dihedral_angle_4_deg 23.637 r_dihedral_angle_3_deg 14.795 r_dihedral_angle_1_deg 5.166 r_angle_refined_deg 1.875 r_angle_other_deg 0.929 r_chiral_restr 0.157 r_bond_refined_d 0.018 r_gen_planes_refined 0.011 r_gen_planes_other 0.005
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.092 r_dihedral_angle_4_deg 23.637 r_dihedral_angle_3_deg 14.795 r_dihedral_angle_1_deg 5.166 r_angle_refined_deg 1.875 r_angle_other_deg 0.929 r_chiral_restr 0.157 r_bond_refined_d 0.018 r_gen_planes_refined 0.011 r_gen_planes_other 0.005 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1214 Nucleic Acid Atoms Solvent Atoms 91 Heterogen Atoms 70
Software Software Software Name Purpose HKL-3000 data collection HKL-3000 data scaling REFMAC refinement PDB_EXTRACT data extraction HKL data scaling