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Solution structure of the de novo mini protein HHH_rd1_0142
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 15N NOESY 150 mM unlabeled sodium chloride, 400 uM [U-13C; U-15N] protein, 50 mM unlabeled sodium phosphate 95% H2O/5% D2O 150 mM 7.4 1 Pa 298 Bruker AVANCE II 800 6 3D 13C NOESY (aromatic and aliphatic) 150 mM unlabeled sodium chloride, 400 uM [U-13C; U-15N] protein, 50 mM unlabeled sodium phosphate 95% H2O/5% D2O 150 mM 7.4 1 Pa 298 Bruker AVANCE II 800 2 3D HNCA 150 mM unlabeled sodium chloride, 400 uM [U-13C; U-15N] protein, 50 mM unlabeled sodium phosphate 95% H2O/5% D2O 150 mM 7.4 1 Pa 298 Bruker AVANCE III 600 3 3D HNCO 150 mM unlabeled sodium chloride, 400 uM [U-13C; U-15N] protein, 50 mM unlabeled sodium phosphate 95% H2O/5% D2O 150 mM 7.4 1 Pa 298 Bruker AVANCE III 600 4 3D CBCA(CO)NH 150 mM unlabeled sodium chloride, 400 uM [U-13C; U-15N] protein, 50 mM unlabeled sodium phosphate 95% H2O/5% D2O 150 mM 7.4 1 Pa 298 Bruker AVANCE III 600 5 3D HBHA(CO)NH 150 mM unlabeled sodium chloride, 400 uM [U-13C; U-15N] protein, 50 mM unlabeled sodium phosphate 95% H2O/5% D2O 150 mM 7.4 1 Pa 298 Bruker AVANCE III 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600 2 Bruker AVANCE II 800
NMR Refinement Method Details Software molecular dynamics short restrained dynamics simluation in explicit solvent CNS
NMR Ensemble Information Conformer Selection Criteria 20 structures for lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read 2 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment ABACUS Lemak and Arrowsmith 4 peak picking ABACUS Lemak and Arrowsmith