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thaumatin soaked with selenourea for 10 min
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 750 mM sodium/potassium tartrate, 100 mM citrate buffer pH 6.5
Crystal Properties Matthews coefficient Solvent content 2.82 56.31
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.615 α = 90 b = 57.615 β = 90 c = 150.808 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2016-07-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-BM 0.978 APS 22-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.55 50 97.7 0.079 0.092 41 7.3 35390
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.55 1.61 95.9 0.089 0.7 1.9 9.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.55 31.65 33641 1749 94.18 0.13159 0.12983 0.16618 0.1701 RANDOM 19.902
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.13 0.13 -0.26
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.13 r_sphericity_free 26.581 r_dihedral_angle_4_deg 12.982 r_sphericity_bonded 12.335 r_dihedral_angle_3_deg 11.107 r_dihedral_angle_1_deg 6.449 r_long_range_B_refined 3.797 r_scbond_it 3.359 r_mcangle_it 2.534 r_mcbond_it 2.049
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.13 r_sphericity_free 26.581 r_dihedral_angle_4_deg 12.982 r_sphericity_bonded 12.335 r_dihedral_angle_3_deg 11.107 r_dihedral_angle_1_deg 6.449 r_long_range_B_refined 3.797 r_scbond_it 3.359 r_mcangle_it 2.534 r_mcbond_it 2.049 r_angle_refined_deg 1.274 r_rigid_bond_restr 0.986 r_chiral_restr 0.082 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1536 Nucleic Acid Atoms Solvent Atoms 196 Heterogen Atoms 62
Software Software Software Name Purpose REFMAC refinement HKL-3000 data reduction HKL-3000 data scaling SHELXD phasing