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Ribosome assembly factor NSA1: C-terminal truncation
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 298 20.1%(v/v) PEG 1500, 13.4%(v/v) PEG 400, 0.1M HEPES/ Sodium hydroxide pH 7.5
Crystal Properties Matthews coefficient Solvent content 1.84 37.11
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.327 α = 90 b = 81.052 β = 90 c = 87.371 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2016-02-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-BM 1.0000 APS 22-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.3 59.42 99.9 29.6 7.2 93271
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.3 59.42 93271 1994 99.86 0.1296 0.1289 0.1292 0.1618 0.1624 RANDOM 21.961
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.02 0.01 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.634 r_sphericity_free 24.874 r_dihedral_angle_3_deg 14.277 r_dihedral_angle_4_deg 13.687 r_sphericity_bonded 12.597 r_dihedral_angle_1_deg 7.357 r_rigid_bond_restr 6.123 r_mcangle_it 3.851 r_mcbond_it 3.535 r_mcbond_other 3.481
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.634 r_sphericity_free 24.874 r_dihedral_angle_3_deg 14.277 r_dihedral_angle_4_deg 13.687 r_sphericity_bonded 12.597 r_dihedral_angle_1_deg 7.357 r_rigid_bond_restr 6.123 r_mcangle_it 3.851 r_mcbond_it 3.535 r_mcbond_other 3.481 r_angle_refined_deg 2.429 r_angle_other_deg 1.225 r_chiral_restr 0.19 r_bond_refined_d 0.03 r_gen_planes_refined 0.014 r_gen_planes_other 0.003 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3007 Nucleic Acid Atoms Solvent Atoms 440 Heterogen Atoms
Software Software Software Name Purpose HKL-2000 data collection HKL-2000 data scaling SOLVE phasing RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction