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Cryo-EM structure of jasplakinolide-stabilized malaria parasite F-actin at near-atomic resolution
ELECTRON MICROSCOPY
Refinement
RMS Deviations
Key
Refinement Restraint Deviation
r_dihedral_angle_2_deg
23.842
r_long_range_B_refined
20.053
r_long_range_B_other
20.053
r_scangle_other
13.4
r_mcangle_it
10.792
r_mcangle_other
10.791
r_dihedral_angle_4_deg
9.302
r_dihedral_angle_3_deg
8.416
r_scbond_it
7.932
r_scbond_other
7.932
RMS Deviations
Key
Refinement Restraint Deviation
r_dihedral_angle_2_deg
23.842
r_long_range_B_refined
20.053
r_long_range_B_other
20.053
r_scangle_other
13.4
r_mcangle_it
10.792
r_mcangle_other
10.791
r_dihedral_angle_4_deg
9.302
r_dihedral_angle_3_deg
8.416
r_scbond_it
7.932
r_scbond_other
7.932
r_dihedral_angle_1_deg
6.648
r_mcbond_it
6.523
r_mcbond_other
6.523
r_angle_refined_deg
1.374
r_angle_other_deg
1.129
r_chiral_restr
0.075
r_bond_refined_d
0.01
r_gen_planes_refined
0.006
r_bond_other_d
0.004
r_gen_planes_other
0.003
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Sample
Plasmodium falciparum actin 1 filament stabilized by jasplakinolide
Specimen Preparation
Sample Aggregation State
FILAMENT
Vitrification Instrument
GATAN CRYOPLUNGE 3
Cryogen Name
ETHANE
Sample Vitrification Details
Sample (2 uL of JAS-stabilized F-actin solution) was applied to a glow-discharged holey carbon grid, incubated for 30 s and manually blotted for 4 s f ...
Sample (2 uL of JAS-stabilized F-actin solution) was applied to a glow-discharged holey carbon grid, incubated for 30 s and manually blotted for 4 s from the backside with filter paper.