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CRYSTAL STRUCTURE OF STREPTAVIDIN WITH PEPTIDE GNSFDDWLASKG
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 293 0.1M Potassium chloride
0.1M HEPES pH 7.5
15% PEG6000
Crystal Properties Matthews coefficient Solvent content 2.58 52.24
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 58.31 α = 104.38 b = 58.305 β = 91.03 c = 88.285 γ = 88.43
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M-F 2015-07-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 0.70000 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.27 85.51 97 0.072 0.998 7.71 1.74 273857
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.27 85.51 273857 14193 96.95 0.18141 0.18024 0.1799 0.20373 0.2037 RANDOM 20.08
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.09 1.24 0.71 -0.52 -0.12 0.63
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.639 r_sphericity_free 23.824 r_dihedral_angle_4_deg 16.853 r_dihedral_angle_3_deg 11.928 r_sphericity_bonded 7.906 r_dihedral_angle_1_deg 6.787 r_long_range_B_refined 2.941 r_long_range_B_other 2.691 r_scangle_other 2.015 r_mcangle_other 1.936
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.639 r_sphericity_free 23.824 r_dihedral_angle_4_deg 16.853 r_dihedral_angle_3_deg 11.928 r_sphericity_bonded 7.906 r_dihedral_angle_1_deg 6.787 r_long_range_B_refined 2.941 r_long_range_B_other 2.691 r_scangle_other 2.015 r_mcangle_other 1.936 r_mcangle_it 1.933 r_scbond_it 1.687 r_scbond_other 1.686 r_mcbond_it 1.536 r_mcbond_other 1.535 r_rigid_bond_restr 1.51 r_angle_refined_deg 1.415 r_angle_other_deg 0.907 r_chiral_restr 0.096 r_bond_refined_d 0.012 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7984 Nucleic Acid Atoms Solvent Atoms 1108 Heterogen Atoms 48
Software Software Software Name Purpose REFMAC refinement XDS data reduction SADABS data scaling PHASER phasing