5LBJ
Solution structure of the bacterial toxin LdrD in Tetrafluorethanol
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 1 mM 1H LdrD | trifluoroethanol/water | 0 | 7 | 1 bar | 298 | Bruker AVANCE III 700 |
2 | 2D TOCSY | 1 mM 1H LdrD | trifluoroethanol/water | 0 | 7 | 1 bar | 298 | Bruker AVANCE III 700 |
3 | 2D 1H-13C HSQC | 1 mM 1H LdrD | trifluoroethanol/water | 0 | 7 | 1 bar | 298 | Bruker AVANCE III 700 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III | 700 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | CNS |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
7 | refinement | CNS | 1.3 | Brunger, Adams, Clore, Gros, Nilges and Read |
2 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
4 | peak picking | Sparky | Goddard | |
6 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |