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Structure Of the LIMK1-ATPgammaS-CFL1 Complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1Q8G 1Q8G, 3S95 experimental model PDB 3S95 1Q8G, 3S95
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 277 35% pentaerythritol propoxylate 5/4, 0.1 M HEPES pH 7.5, 0.2 M potassium chloride
Crystal Properties Matthews coefficient Solvent content 4.09 69.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 80.679 α = 90 b = 80.679 β = 90 c = 237.59 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2016-04-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 0.97949 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.53 34.94 100 0.061 19.1 12.2 30888
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1Q8G, 3S95 2.53 34.94 29335 1489 99.93 0.22889 0.22614 0.226 0.28395 0.2817 RANDOM 88.725
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.19 1.59 3.19 -10.34
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.254 r_dihedral_angle_4_deg 18.569 r_dihedral_angle_3_deg 18.16 r_long_range_B_other 13.444 r_long_range_B_refined 13.435 r_scangle_other 11.168 r_mcangle_it 10.571 r_mcangle_other 10.569 r_scbond_it 8.393 r_scbond_other 8.384
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.254 r_dihedral_angle_4_deg 18.569 r_dihedral_angle_3_deg 18.16 r_long_range_B_other 13.444 r_long_range_B_refined 13.435 r_scangle_other 11.168 r_mcangle_it 10.571 r_mcangle_other 10.569 r_scbond_it 8.393 r_scbond_other 8.384 r_dihedral_angle_1_deg 7.933 r_mcbond_it 7.576 r_mcbond_other 7.567 r_angle_refined_deg 1.846 r_angle_other_deg 1.076 r_chiral_restr 0.099 r_bond_refined_d 0.015 r_gen_planes_refined 0.008 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3367 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 31
Software Software Software Name Purpose REFMAC refinement iMOSFLM data reduction Aimless data scaling PHASER phasing