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Glycogen Synthase Kinase 3 beta Complexed with BRD0705
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 298 Reservoir: 0.1 M Bis-Tris, pH 6.5, 25% w/v PEG3350
Crystal Properties Matthews coefficient Solvent content 2.64 53.47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 104.625 α = 90 b = 85.428 β = 95.08 c = 112.071 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2015-02-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08ID-1 0.9795 CLSI 08ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 50 100 0.083 0.098 0.05 11.3 3.8 30464
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.6 2.69 100 0.604 0.782 3.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.6 50 28790 1552 99.85 0.1818 0.1785 0.1835 0.2438 0.243 RANDOM 70.589
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -3.94 0.28 -2.06 5.86
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.494 r_dihedral_angle_4_deg 22.096 r_dihedral_angle_3_deg 18.963 r_mcangle_it 7.929 r_dihedral_angle_1_deg 7.507 r_mcbond_it 5.424 r_mcbond_other 5.423 r_angle_refined_deg 1.719 r_angle_other_deg 1.037 r_chiral_restr 0.088
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.494 r_dihedral_angle_4_deg 22.096 r_dihedral_angle_3_deg 18.963 r_mcangle_it 7.929 r_dihedral_angle_1_deg 7.507 r_mcbond_it 5.424 r_mcbond_other 5.423 r_angle_refined_deg 1.719 r_angle_other_deg 1.037 r_chiral_restr 0.088 r_bond_refined_d 0.013 r_gen_planes_refined 0.008 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5422 Nucleic Acid Atoms Solvent Atoms 97 Heterogen Atoms 48
Software Software Software Name Purpose SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction