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Synechocystis apocarotenoid oxygenase (ACO) mutant - Trp149Ala
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4OU9
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 281 BisTris Propane, sodium polyacrylate 2100, sodium chloride
Crystal Properties Matthews coefficient Solvent content 2.78 55.72
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 118.14 α = 90 b = 125.26 β = 90 c = 203.57 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2015-11-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-E 0.97921 APS 24-ID-E
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 48.62 100 0.19 0.995 11 8.2 75013
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.87 100 0.2043 1.1 3.77
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 4OU9 2.8 48.62 71417 3595 99.96 0.19998 0.19804 0.2027 0.23905 0.2412 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.01 -2.03 0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.992 r_dihedral_angle_4_deg 15.518 r_dihedral_angle_3_deg 13.651 r_mcangle_it 9.12 r_dihedral_angle_1_deg 6.41 r_mcbond_it 5.855 r_mcbond_other 5.854 r_angle_refined_deg 1.375 r_angle_other_deg 1.034 r_chiral_restr 0.073
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.992 r_dihedral_angle_4_deg 15.518 r_dihedral_angle_3_deg 13.651 r_mcangle_it 9.12 r_dihedral_angle_1_deg 6.41 r_mcbond_it 5.855 r_mcbond_other 5.854 r_angle_refined_deg 1.375 r_angle_other_deg 1.034 r_chiral_restr 0.073 r_bond_refined_d 0.011 r_gen_planes_refined 0.008 r_bond_other_d 0.006 r_gen_planes_other 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 18814 Nucleic Acid Atoms Solvent Atoms 154 Heterogen Atoms 7
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling PHASER phasing