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Structure of the ankyrin domain of AnkB from Legionella Pneumophila
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 0.2 M lithium sulfate, 0.1 M HEPES pH 7.5, 25% (w/v) PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.15 42.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.322 α = 90 b = 80.485 β = 90 c = 54.077 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 270 2014-06-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE F1 0.91790 CHESS F1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.15 50 98.6 0.104 22.3 3.6 39731
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.15 1.17 97.9 0.435 3.8 3.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.15 45.03 39731 2113 98.64 0.17395 0.17303 0.1811 0.1911 0.1983 RANDOM 14.613
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.43 0.69 -0.26
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.886 r_dihedral_angle_4_deg 25.036 r_dihedral_angle_3_deg 13.452 r_sphericity_free 6.985 r_dihedral_angle_1_deg 5.424 r_sphericity_bonded 3.191 r_rigid_bond_restr 2.493 r_angle_refined_deg 1.697 r_scbond_it 1.436 r_long_range_B_refined 1.205
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.886 r_dihedral_angle_4_deg 25.036 r_dihedral_angle_3_deg 13.452 r_sphericity_free 6.985 r_dihedral_angle_1_deg 5.424 r_sphericity_bonded 3.191 r_rigid_bond_restr 2.493 r_angle_refined_deg 1.697 r_scbond_it 1.436 r_long_range_B_refined 1.205 r_mcbond_it 0.9 r_mcangle_it 0.735 r_chiral_restr 0.099 r_bond_refined_d 0.016 r_gen_planes_refined 0.009 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 916 Nucleic Acid Atoms Solvent Atoms 166 Heterogen Atoms 11
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling SHELXDE phasing